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Found 98 dataset(s) matching "microbiome".
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The files provided in this U.S. Geological Survey (USGS) data release (Kellogg and Voelschow, 2021) are the raw DNA sequence files referenced in the associated journal article (Kellogg and Pratte,...
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<p>Data include microbial count data (CFUs), 16S-rRNA copy number data (qPCR), and microbial community (microbiome) data from the guts of the invasive tephritid fruit flies, melon fly (Zeugodacus...
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Across taxa, animals with depleted intestinal microbiomes show disrupted behavioral phenotypes. Axenic (i.e., microbe-free) mice, zebrafish, and fruit flies exhibit increased locomotor behavior,...
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Experiments tested if changes in soil microbiomes within reconstructed freshwater wetlands were associated with exposure to elevated Cu concentrations originating from immersed Micronized Copper...
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<p>The objective of this study was to explore the R. microplus microbiome by applying the bacterial 16S tag-encoded FLX-titanium amplicon pyrosequencing (bTEFAP) technique to characterize its...
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<p>The Baylor College of Medicine recently sequenced and annotated the <em>Homalodisca vitripennis</em> genome as part of the i5k pilot project.</p> <p>The Glassy-winged sharpshooter, GWSS,...
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<p>Using the SHIME (an in vitro simulator of the human gut microbiome) we studied changes in the gut metabolome that occurred in response to the administration of the Laticaseibacillus rhamnosus...
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<p>House flies (<em>Musca domestica</em> L.) are vectors of human and animal pathogens at livestock operations. Microbial communities in flies are acquired from, and correlate with, their local...
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Space habitation provides unique challenges in built environments isolated from Earth. We produced a 3D map of the microbes and metabolites throughout the International Space Station (ISS), with...
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This repository contains all submissions made to the Mosaic Standards challenge from the period of the challenge opening through December 31st, 2019. The Mosaic Standards Challenge asked the...
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<p><em>Culicoides</em> biting midges are important vectors of diverse microbes such as viruses, protozoa, and nematodes that cause diseases in wild and domestic animals. However, little is known...
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<p>This Ag Data Commons submission includes the 94 sunflower paired-end sequencing FASTQ files, the corresponding 16S bacterial FASTQ files, and other relevant data to the study described...
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White-nose syndrome (WNS), a fungal disease that has caused catastrophic population declines of bats in eastern North America, is rapidly spreading across the continent and now threatens...
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<p dir="ltr">This is a dataset consisting of donor-specific collections of 78 metagenomes (13 / donor) and 143 metagenome-assembled genomes (MAGs) representing the gut microbiomes of six healthy...
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This dataset is two tables with data collected and derived from polar bears sampled in Alaska’s southern Beaufort Sea during 2008-2019. Collected data includes demographic and morphometric...
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The U.S. Geological Survey (USGS) Coral Reef Ecosystems Studies (CREST) project (https://coastal.er.usgs.gov/crest/) provides science that helps Department of Interior and other resource managers...
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<p>A 24-h in vitro culturing method was used to determine whether fructooligosaccharide (FOS) treatment effects on the human gut microbiome has a differential effect by age, using fecal samples ...
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Investigates the microbial communities of plants and Veggie pillow components with culturable and non-culturable methods providing qualitative and quantitative data. This studies also stresses the...
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Spaceflight imposes numerous adaptive challenges for terrestrial life. The reduction in gravity, or microgravity, represents a novel environment that can disrupt homeostasis of many physiological...
