Watford_Novel_application__NPMI_Biomedlit_genesets_usecase_breast_cancer

Published by U.S. EPA Office of Research and Development (ORD) | U.S. Environmental Protection Agency | Metadata Last Checked: June 27, 2025 | Last Modified: 2018-10-15

We present a novel use of normalized pointwise mutual information (NPMI) to mine biomedical literature for gene associations with biological concepts as represented by Medical Subject Headings (MeSH terms) in PubMed. This dataset is associated with the following publication: Watford, S., R. Grashow, V. De La Rosa, R. Rudel, K. Paul-Friedman, and M. Martin. Novel application of normalized pointwise mutual information (NPMI) to mine biomedical literature for gene sets associated with disease: Use case in breast carcinogenesis. Computational Toxicology. Elsevier B.V., Amsterdam, NETHERLANDS, 7: 46-57, (2018).

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Complete Metadata

bureauCode	[ "020:00" ]
identifier	https://doi.org/10.23719/1502465
programCode	[ "020:095" ]
references	[ "https://doi.org/10.1016/j.comtox.2018.06.003" ]
rights	null