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Found 23 dataset(s) matching "microbial taxonomic community".
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An abundance matrix (EX_taxonomic_lineage.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a ratio of all sequences obtained...
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<p><em>Culicoides</em> biting midges are important vectors of diverse microbes such as viruses, protozoa, and nematodes that cause diseases in wild and domestic animals. However, little is known...
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The EX_Genome_Assemblies.zip file contain the contig sequences (i.e. assembly) of fifteen isolates used for genomic and antibiotic resistance genes (ARG) analysis. EX_OTU.fasta file contain the...
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To determine how native and non-native lineages of Phragmites australis affect and respond to soil bacteria, fungi and oomycetes, we collected live rhizomes, seeds and soil from native and...
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The Permian Basin, straddling New Mexico and Texas, is one of the most productive oil and gas (OG) provinces in the United States. OG production yields large volumes of wastewater that contain...
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<p>House flies (<em>Musca domestica</em> L.) are vectors of human and animal pathogens at livestock operations. Microbial communities in flies are acquired from, and correlate with, their local...
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The data were gathered as a preliminary assessment of soil microbiology and conditions in selected urban stormwater best management practices (BMPs) in Clarksburg, MD. Four bioretention facilities...
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Data were collected in August and September 2015 for analysis of bacteria communities of the Grand Calumet River and associated shorelines. Water samples were collected on three occasions...
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Water resources around the world are contaminated with per- and polyfluoroalkyl substances (PFAS) due to releases from point sources on military installations, fire training centers, and chemical...
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Microbial biofilm communities are composed of fungi, bacteria, and phytoplankton taxonomic groups (e.g., chlorophytes, diatoms and cyanobacteria), which inhabit the surface of intertidal mudflats....
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Microbial biofilm communities are composed of fungi, bacteria, and phytoplankton taxonomic groups (e.g., cyanobacteria, diatoms, and chlorophytes), which inhabit the surface of intertidal...
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Microbial biofilm communities are composed of fungi, bacteria, and phytoplankton taxonomic groups (e.g., cyanobacteria, diatoms, and chlorophytes), which inhabit the surface of intertidal...
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Microbial biofilm communities are composed of fungi, bacteria, and phytoplankton taxonomic groups (e.g., chlorophytes, diatoms and cyanobacteria), which inhabit the surface of intertidal mudflats....
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Acetylene (C2H2) is a molecule rarely found in nature, with few known natural sources, but acetylenotrophic microorganisms can use acetylene as their primary carbon and energy source. As of 2018...
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To determine the differences in soil microbial community composition between native and non-native lineages of Phragmites, we sampled soils from eight sites in the Great Lakes basin where...
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PS_GenBank.fasta file contain the sequences of the bacterial 16S rRNA-encoding gene for each representative sequence. The sequence containing four hypervariable regions was amplified using the...
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<p>To determine whether colony populations of <em>Lasioderma serricorne</em> (cigarette beetle, CB) and <em>Sitophilus oryzae</em> (rice weevil, RW) vectored microbes, and to identify possible...
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The raw sequence reads have been submitted to the NCBI Sequence Read Archive (SRA) under the BioProject PRJNA961987 with the following BioSample numbers: SAMN39596420, SAMN39596421, SAMN39596422,...
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An abundance matrix (Table - 16S rRNA taxonomy.xlsx) contains rows as taxonomic lineage, columns as samples, and entries representing the abundance of each lineage as a number of reads and...
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The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the...
