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Found 9 dataset(s) matching "Formalin-fixed paraffin embedded samples".

Demodifying RNA for Transcriptomic Analyses of Archival Formalin-Fixed Paraffin-Embedded Samples
- Organization: U.S. Environmental Protection Agency
- Updated: 2017-09-11 | Harvested: June 27, 2025 at 09:26 PM
Low RNA yield and quality limit use of formalin-fixed paraffin-embedded (FFPE) tissue samples for genomic analyses. In this study, we evaluated methods to demodify RNA highly fragmented and...
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Dose-Response Analysis of RNA-Seq Profiles in Archival Formalin-Fixed Paraffin-Embedded Samples.
- Organization: U.S. Environmental Protection Agency
- Updated: 2016-12-01 | Harvested: June 27, 2025 at 09:04 PM
se of archival resources has been limited to date by inconsistent methods for genomic profiling of degraded RNA from formalin-fixed paraffin-embedded (FFPE) samples. RNA-seq offers a novel way to...
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formalin effects data
- Organization: U.S. Environmental Protection Agency
- Updated: 2020-04-21 | Harvested: June 27, 2025 at 09:48 PM
RNA sequencing data from paired: (1) fresh-frozen, (2) direct-fixed in formalin for 18 hours, (3) frozen then formalin-fixed, or (4) frozen then ethanol-fixed and paraffin-embedded...
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Targeted RNA-sequencing of aged FFPE liver tissue data
- Organization: U.S. Environmental Protection Agency
- Updated: 2021-09-23 | Harvested: June 27, 2025 at 10:19 PM
Gene expression data on >20 year-old, paired frozen and archival FFPE liver samples generated using targeted resequencing (TempO-Seq) and whole-genome RNA-sequencing methods. Samples were...
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FFPE_DNA_MS_v12_20210211
- Organization: U.S. Environmental Protection Agency
- Updated: 2021-02-17 | Harvested: June 27, 2025 at 10:19 PM
The primary goal of this study was to investigate the effects of whether organocatalyst (ORGΔ) treatment improves DNA-sequencing data by overcoming formalin-induced artifacts from clinical...
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Abundance of 50 transcripts from microdissected liver samples of smallmouth bass
- Organization: Department of the Interior
- Updated: 20200925 | Harvested: July 16, 2025 at 03:30 PM
There is an increasing emphasis on effects-based monitoring to document responses associated with exposure to complex mixtures of chemicals, climate change, pathogens, parasites and other...
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Enhancement of RNA from FFPE v27.2
- Organization: U.S. Environmental Protection Agency
- Updated: 2019-06-28 | Harvested: June 27, 2025 at 09:31 PM
This data set is composed of Tables, Figures, zip file containing the whole manuscript individual datasets. This dataset is associated with the following publication: Wehmas, L., C. Wood, B....
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Expression of LRP and MDR1 in locally advanced breast cancer predicts axillary node invasion at the time of rescue mastectomy after induction chemotherapy
- Organization: U.S. Department of Health & Human Services
- Updated: 2025-09-06 | Harvested: September 06, 2025 at 08:30 AM
Background: Axillary node status after induction chemotherapy for locally advanced breast cancer has been shown on multivariate analysis to be an independent predictor of relapse....
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Expression of nm23-H1 gene product in esophageal squamous cell carcinoma and its association with vessel invasion and survival
- Organization: U.S. Department of Health & Human Services
- Updated: 2025-09-06 | Harvested: September 06, 2025 at 10:34 AM
Background We assessed the nm23-H1 gene product expression and its relationship with lymphatic and blood vessel invasion in patients with esophageal squamous cell carcinoma. ...
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