Search Data.gov
Found 132 dataset(s) matching "16S".
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<p dir="ltr">We conducted a fly rearing experiment to characterize diet-induced changes in the microbiome of female <i>Bactrocera dorsalis</i>. In order to explicitly investigate the impacts of...
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<p dir="ltr">The SHIME® (Simulator of the Human Intestinal Microbial Ecology) was used for in vitro cultivation of the human gut microbiota (3 donors) prior to and following the addition of...
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The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the...
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<p>This Ag Data Commons submission includes the 94 sunflower paired-end sequencing FASTQ files, the corresponding 16S bacterial FASTQ files, and other relevant data to the study described...
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<p dir="ltr">The SHIME® (Simulator of the Human Intestinal Microbial Ecology) was used for in vitro cultivation of the human gut microbiota (3 donors) with additions of either soluble or insoluble...
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The EX_Genome_Assemblies.zip file contain the contig sequences (i.e. assembly) of fifteen isolates used for genomic and antibiotic resistance genes (ARG) analysis. EX_OTU.fasta file contain the...
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<p>This repository contains the code and data to reproduce the figures and analyses in the paper "Microbiota of maize kernels as influenced by Aspergillus flavus infection in susceptible and...
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<p>NCBI BioProject</p> <ul> <li>Description: Houses the amplicon sequencing data (16S and ITS) used in the study.</li> <li>BioProject ID: PRJNA1114128</li> <li>Link:...
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<p>A 24-h in vitro culturing method was used to determine whether fructooligosaccharide (FOS) treatment effects on the human gut microbiome has a differential effect by age, using fecal samples ...
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These datasets contain microbial community data from groundwater samples collected at an in situ bioremediation site located at the former Naval Air Warfare Center (NAWC), West Trenton, NJ. DNA...
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Bravo Dome is a commercial natural CO2 field that supplies the gas to depleted oil fields for enhanced oil recovery. In order to understand the distribution of CO2 across the greater Bravo Dome...
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In order to determine the innate microbial community of shale gas reservoirs and how they are impacted by hydraulic fracturing, this study analyzed biomass collected from produced water and rock...
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The Grand Calumet River flows through northwestern Indiana and was designated an EPA Area of Concern (AOC) in 1987. There are multiple legacy pollutants in the river including but not limited to...
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This repository provides the raw data, analysis code, and results generated during a systematic evaluation of the impact of selected experimental protocol choices on the metagenomic sequencing...
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Background Although closely related, the alpha-proteobacteria Wolbachia and the Rickettsiacae (Rickettsia and Ehrlichia), employ different evolutionary life history strategies. Wolbachia...
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Dataset of DNA sequence data from two mitochondrial loci (COI and 16S) used to infer the phylogeny of oysters in the genus Ostrea along the Pacific coast of North America. This dataset is not...
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Background The cosmopolitan moon jelly Aurelia is characterized by high degrees of morphological and ecological plasticity, and subsequently by an unclear taxonomic status. The latter...
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<p dir="ltr">Larvae from the petroleum oil fly, Helaeomyia petrolei, live in the asphaltene and polyaromatic hydrocarbon rich asphalt seeps of Rancho La Brea, Los Angeles, California. These larvae...
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The files provided in this U.S. Geological Survey (USGS) data release (Kellogg and others, 2021) include an amplicon sequence variant (ASV) table and the raw 16S rRNA gene amplicon files from six...
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<p dir="ltr">Amplicon sequencing data (16S and ITS) was deposited to NCBI Genbank under BioProject ID PRJNA1200133 (<a href="https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1200133" rel="noopener...
