Search Data.gov
Found 30 dataset(s) matching "OTU".
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An abundance matrix (EX_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained for each individual sample....
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An abundance matrix (BM_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained for each individual sample....
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An abundance matrix (PS_OTU.xlsx) contains rows as OTU, columns as samples, and entries representing the abundance of each OTU as a ratio of all sequences obtained for each individual sample....
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Habitat use, diet, prey availability and foraging ecology of the endangered Hawaiian hoary bat (Lasiurus cinereus semotus, Vespertilionidae), was examined in the east Maui region inclusive of the...
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Habitat use, diet, prey availability and foraging ecology of the endangered Hawaiian hoary bat (Lasiurus cinereus semotus, Vespertilionidae), was examined in the east Maui region inclusive of the...
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Data associated with the Hydrobiologia article titled "Spatial and temporal dynamics of a freshwater eukaryotic plankton community revealed via 18S rRNA gene metabarcoding." They include the...
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Habitat use, diet, prey availability and foraging ecology of the endangered Hawaiian hoary bat (Lasiurus cinereus semotus, Vespertilionidae), was examined in the east Maui region inclusive of the...
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Habitat use, diet, prey availability and foraging ecology of the endangered Hawaiian hoary bat (Lasiurus cinereus semotus, Vespertilionidae), was examined in the east Maui region inclusive of the...
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DNA sequence data output with assigned taxonomic IDs. This dataset is associated with the following publication: Hatzenbuhler, C., J.R. Kelly, J. Martinson, S. Okum, and E. Pilgrim. Sensitivity...
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To determine the differences in soil microbial community composition between native and non-native lineages of Phragmites, we sampled soils from eight sites in the Great Lakes basin where...
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To determine how native and non-native lineages of Phragmites australis affect and respond to soil bacteria, fungi and oomycetes, we collected live rhizomes, seeds and soil from native and...
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This reference contains tabular datasets resulting from the eDNA pilot study on National Wildlife Refuges. 1. ZIP file contains all datasets as received from the authors: a folder for each...
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These metadata contain links to the original sequences on GenBank. These data show the final OTU and metadata tables for each environmental sample collected. Additionally, we included OTU tables...
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This data record contains arbuscular mycorrhizal fungi (AMF) operational taxonomic unit (OTU) occurrences in native prairie plant roots collected from remnant prairies and reconstruction of...
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The EX_Genome_Assemblies.zip file contain the contig sequences (i.e. assembly) of fifteen isolates used for genomic and antibiotic resistance genes (ARG) analysis. EX_OTU.fasta file contain the...
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The fasta file (BM_OTU.fasta) contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the...
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PS_GenBank.fasta file contain the sequences of the bacterial 16S rRNA-encoding gene for each representative sequence. The sequence containing four hypervariable regions was amplified using the...
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A table (DP_OTU.xlsx) contains rows as OTUs, columns as samples, and entries representing the abundance of each OTU. This dataset is associated with the following publication: Gomez-Alvarez, V.,...
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This data record contains arbuscular mycorrhizal fungi (AMF) operational taxonomic unit (OTU) occurrences with native prairie plant species roots collected from paired remnant and reconstructed...
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<p>The objective of this study was to explore the R. microplus microbiome by applying the bacterial 16S tag-encoded FLX-titanium amplicon pyrosequencing (bTEFAP) technique to characterize its...
